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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12846 and 12847 are separated by 606 nucleotides
12847 and 12848 are separated by 496 nucleotides
12848 and 12849 are separated by 199 nucleotides
12849 and 12850 are separated by 315 nucleotides
mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277,974 to 281,759
12846
mRNA_4479: 12847 - K17290 HTATIP2 oxidoreductase, at 282,366 to 283,335
12847
mRNA_4480: 12848 - Hypothetical Protein, at 283,832 to 284,551
12848
mRNA_4481: 12849 - Hypothetical Protein, at 284,751 to 285,386
12849
mRNA_4482: 12850 - K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4, at 285,702 to 287,837
12850
Group
Condition
mRNA
_4478
mRNA
_4479
mRNA
_4480
mRNA
_4481
mRNA
_4482
12846
12847
12848
12849
12850
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-3.9
-0.0
+0.7
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-1.6
-0.1
+0.4
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.9
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-1.6
+0.0
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-1.2
+0.1
+0.5
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.9
-0.1
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.3
+0.1
-0.5
N.D.
growth on ypd
YPD
+0.3
-0.6
+0.2
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.6
-0.0
+0.8
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
-0.0
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.7
+0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
+0.5
+0.1
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
-0.0
+0.9
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
+0.2
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
+0.2
+0.5
N.D.
auxotrophy
Dropout Complete
+0.3
+0.7
+0.1
-0.5
N.D.
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.2
+0.2
N.D.
auxotrophy
YNB Glucose
+0.4
+0.6
+0.1
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+1.3
+0.1
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.6
+0.1
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.8
+0.2
-0.0
N.D.
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