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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12847 and 12848 are separated by 496 nucleotides
12848 and 12849 are separated by 199 nucleotides
12849 and 12850 are separated by 315 nucleotides
12850 and 12851 are separated by 107 nucleotides
mRNA_4479: 12847 - K17290 HTATIP2 oxidoreductase, at 282,366 to 283,335
12847
mRNA_4480: 12848 - Hypothetical Protein, at 283,832 to 284,551
12848
mRNA_4481: 12849 - Hypothetical Protein, at 284,751 to 285,386
12849
mRNA_4482: 12850 - K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4, at 285,702 to 287,837
12850
mRNA_4483: 12851 - SUPERFAMILY--SSF53098, at 287,945 to 289,726
12851
Group
Condition
mRNA
_4479
mRNA
_4480
mRNA
_4481
mRNA
_4482
mRNA
_4483
12847
12848
12849
12850
12851
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-3.9
-0.0
+0.7
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
-0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.6
+0.0
+0.5
N.D.
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.2
+0.2
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
+0.1
-0.5
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.2
+0.1
+0.5
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.1
+0.3
N.D.
N.D.
growth on ypd
YPD
-0.6
+0.2
-0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
+0.1
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.0
+0.8
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
+0.0
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.5
+0.1
-0.3
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.2
-0.2
N.D.
N.D.
auxotrophy
YNB Glucose
+0.6
+0.1
-0.4
N.D.
N.D.
auxotrophy
Dropout Complete
+0.7
+0.1
-0.5
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
+0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.1
-0.2
N.D.
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.2
+0.2
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.9
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.8
+0.2
-0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
+1.3
+0.1
-0.3
N.D.
N.D.
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