Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12849 and 12850 are separated by 315 nucleotides12850 and 12851 are separated by 107 nucleotides12851 and 12852 are separated by 153 nucleotides12852 and 12853 are separated by 222 nucleotides mRNA_4481: 12849 - Hypothetical Protein, at 284,751 to 285,386 12849 mRNA_4482: 12850 - K03144 TFIIH4, GTF2H4, TFB2 transcription initiation factor TFIIH subunit 4, at 285,702 to 287,837 12850 mRNA_4483: 12851 - SUPERFAMILY--SSF53098, at 287,945 to 289,726 12851 mRNA_4484: 12852 - KOG2588 Predicted DNA-binding protein, at 289,880 to 293,833 12852 mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294,056 to 296,303 12853
Group Condition mRNA_4481 mRNA_4482 mRNA_4483 mRNA_4484 mRNA_4485
12849 12850 12851 12852 12853
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. N.D. -2.9 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. -2.8 +0.6
auxotrophy YNB Glucose -0.4 N.D. N.D. -0.9 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. -0.2 -1.0
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. -0.8 +0.3
auxotrophy Dropout Complete -0.5 N.D. N.D. +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. N.D. -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. N.D. -0.2 +0.3
growth on ypd YPD -0.0 N.D. N.D. -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. N.D. -0.8 -0.0
growth on oleic acid YNB Glucose +0.2 N.D. N.D. +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. -0.2 +0.6
growth on oleic acid YNB Oleic Acid +0.5 N.D. N.D. +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 N.D. N.D. +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. N.D. +0.2 +0.7
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