Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12853 and 12854 are separated by 273 nucleotides12854 and 12855 are separated by 719 nucleotides12855 and 12856 are separated by 336 nucleotides12856 and 12857 are separated by 215 nucleotides mRNA_4485: 12853 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 294,056 to 296,303 12853 mRNA_4486: 12854 - K01293 E3.4.17.4 Gly-Xaa carboxypeptidase, at 296,577 to 298,255 12854 mRNA_4487: 12855 - K05857 PLCD phosphatidylinositol phospholipase C, delta, at 298,975 to 301,181 12855 mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301,518 to 302,496 12856 mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302,712 to 304,024 12857
Group Condition mRNA_4485 mRNA_4486 mRNA_4487 mRNA_4488 mRNA_4489
12853 12854 12855 12856 12857
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.8 N.D. N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.3 +0.1 N.D. N.D. -0.8
growth on ypd YPD -0.2 -0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.2 N.D. N.D. -0.1
auxotrophy Dropout Complete -0.1 +0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose +0.1 +0.3 N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.2 +0.3 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 N.D. N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.6 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.5 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.1 N.D. N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.6 +0.5 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 +0.7 N.D. N.D. +0.3
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