Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12856 and 12857 are separated by 215 nucleotides12857 and 12858 are separated by 436 nucleotides12858 and 12859 are separated by 225 nucleotides12859 and 12860 are separated by 672 nucleotides mRNA_4488: 12856 - BLAST phospholipase C [Moesziomyces antarcticus T-34], at 301,518 to 302,496 12856 mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302,712 to 304,024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304,461 to 305,865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306,091 to 307,232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307,905 to 309,384 12860
Group Condition mRNA_4488 mRNA_4489 mRNA_4490 mRNA_4491 mRNA_4492
12856 12857 12858 12859 12860
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.2 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.8 -0.4 +0.6 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 +0.2 -0.0 -0.5
auxotrophy YNB Glucose N.D. -0.4 -0.3 +0.1 +0.3
auxotrophy Dropout Complete N.D. -0.1 -0.4 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.1 +0.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.0 -0.3 -0.0 +0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.2 +0.5 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.3 +0.4 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 +0.3 -0.1 -0.5
growth on ypd YPD N.D. -0.0 -0.3 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.2 +0.6 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 -0.1 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 +0.3 +0.1
remove
mRNA_4488
plot
remove
mRNA_4489
plot
remove
mRNA_4490
remove
mRNA_4491
plot
remove
mRNA_4492
plot