Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12857 and 12858 are separated by 436 nucleotides12858 and 12859 are separated by 225 nucleotides12859 and 12860 are separated by 672 nucleotides12860 and 12861 are separated by 191 nucleotides mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302,712 to 304,024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304,461 to 305,865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306,091 to 307,232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307,905 to 309,384 12860 mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309,576 to 311,024 12861
Group Condition mRNA_4489 mRNA_4490 mRNA_4491 mRNA_4492 mRNA_4493
12857 12858 12859 12860 12861
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.2 -0.2 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 -0.1 +0.0 +0.1
auxotrophy Dropout Complete -0.1 -0.4 +0.1 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.0 -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 +0.5 -0.1 -0.8
auxotrophy YNB Glucose -0.4 -0.3 +0.1 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 +0.1 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.3 -0.1 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.1 -0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 +0.5 +0.1 -0.2
growth on oleic acid YNB Glucose +0.0 -0.3 -0.0 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.3 +0.1 -0.5
growth on ypd YPD -0.0 -0.3 +0.5 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.1 +0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 +0.4 +0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.8 -0.4 +0.6 +0.2 +0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.6 -0.1 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.2 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 +0.1 +0.2 +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.3 +0.4 +0.1 +1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 -0.2 -0.1 +1.2
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