Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12859 and 12860 are separated by 672 nucleotides12860 and 12861 are separated by 191 nucleotides12861 and 12862 are separated by 296 nucleotides12862 and 12863 are separated by 156 nucleotides mRNA_4491: 12859 - Hypothetical Protein, at 306,091 to 307,232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307,905 to 309,384 12860 mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309,576 to 311,024 12861 mRNA_4494: 12862 - SUPERFAMILY--SSF52047, at 311,321 to 312,953 12862 mRNA_4495: 12863 - HMMPfam-TRAPP trafficking subunit Trs65-PF12735, at 313,110 to 316,762 12863
Group Condition mRNA_4491 mRNA_4492 mRNA_4493 mRNA_4494 mRNA_4495
12859 12860 12861 12862 12863
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 -0.5 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -1.0 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 -0.5 -0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.5 -0.2 +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.1 -0.8 +0.4 -0.2
auxotrophy YNB Glucose +0.1 +0.3 -0.1 -0.5 +0.1
auxotrophy Dropout Complete +0.1 +0.1 -0.3 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 +0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.2 -0.1 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.1 -0.2 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 +1.2 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.0 -0.3 +0.6
growth on ypd YPD +0.5 +0.1 -0.1 -0.4 +0.5
growth on oleic acid YNB Oleic Acid +0.1 +0.0 +0.3 +0.1 +0.2
growth on oleic acid YNB Glucose -0.0 +0.1 +0.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.5 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.9 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.1 +0.7 +0.4 +0.6
growth on ricinoleic acid YNB Glucose +0.6 +0.2 +0.9 +0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 +1.1 +0.4 +0.6
remove
mRNA_4491
plot
remove
mRNA_4492
plot
remove
mRNA_4493
remove
mRNA_4494
plot
remove
mRNA_4495
plot