Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12863 and 12864 are separated by 284 nucleotides12864 and 12865 are separated by 1764 nucleotides12865 and 12866 are separated by 542 nucleotides12866 and 12867 are separated by 142 nucleotides mRNA_4495: 12863 - HMMPfam-TRAPP trafficking subunit Trs65-PF12735, at 313,110 to 316,762 12863 mRNA_4496: 12864 - SUPERFAMILY--SSF81383, at 317,047 to 318,791 12864 mRNA_4497: 12865 - SUPERFAMILY--SSF81383, at 320,556 to 322,046 12865 mRNA_4498: 12866 - Hypothetical Protein, at 322,589 to 323,741 12866 mRNA_4499: 12867 - K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit, at 323,884 to 327,513 12867
Group Condition mRNA_4495 mRNA_4496 mRNA_4497 mRNA_4498 mRNA_4499
12863 12864 12865 12866 12867
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.6 -0.3 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.6 -0.2 -0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 -0.1 +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.2 -0.0 -1.3 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 +0.0 +0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.1 +0.1 +1.0 -0.4
auxotrophy Dropout Complete +0.2 +0.2 +0.0 -0.7 +0.2
auxotrophy YNB Glucose +0.1 +0.3 +0.1 -0.7 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.0 +0.1 -0.3 -0.0
growth on oleic acid YNB Glucose +0.2 -0.0 +0.1 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.2 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.5 +0.0 -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 +0.1 -0.5 +0.1
growth on ypd YPD +0.5 +0.0 -0.4 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.0 +0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.0 +0.7 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.2 +0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.3 +0.2 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 +0.2 +0.6 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.2 +0.3 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 +0.2 +1.2 +0.1
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