Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12864 and 12865 are separated by 1764 nucleotides12865 and 12866 are separated by 542 nucleotides12866 and 12867 are separated by 142 nucleotides12867 and 12868 are separated by 210 nucleotides mRNA_4496: 12864 - SUPERFAMILY--SSF81383, at 317,047 to 318,791 12864 mRNA_4497: 12865 - SUPERFAMILY--SSF81383, at 320,556 to 322,046 12865 mRNA_4498: 12866 - Hypothetical Protein, at 322,589 to 323,741 12866 mRNA_4499: 12867 - K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit, at 323,884 to 327,513 12867 mRNA_4500: 12868 - K14304 NUP85 nuclear pore complex protein Nup85, at 327,724 to 330,564 12868
Group Condition mRNA_4496 mRNA_4497 mRNA_4498 mRNA_4499 mRNA_4500
12864 12865 12866 12867 12868
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.0 -1.3 +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 -0.3 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.3 +0.3 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 +0.0 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.2 -0.4 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.0 +0.1 -0.3 -0.0 +0.0
growth on ypd YPD +0.0 -0.4 +0.2 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.0 +0.2 -0.0 -0.1
auxotrophy YNB Glucose +0.3 +0.1 -0.7 +0.2 +0.2
auxotrophy Dropout Complete +0.2 +0.0 -0.7 +0.2 +0.4
growth on oleic acid YNB Glucose -0.0 +0.1 -0.2 -0.0 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.0 -0.5 +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.4 -0.1 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.1 -0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.1 -0.5 +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 +1.0 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.3 +0.0 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.0 +0.7 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 +0.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.6 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.2 +1.2 +0.1 +0.0
remove
mRNA_4496
plot
remove
mRNA_4497
plot
remove
mRNA_4498
remove
mRNA_4499
plot
remove
mRNA_4500
plot