Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12869 and 12870 are separated by 342 nucleotides12870 and 12871 are separated by 306 nucleotides12871 and 12872 are separated by 546 nucleotides12872 and 12873 are separated by 63 nucleotides mRNA_4501: 12869 - Hypothetical Protein, at 330,737 to 332,545 12869 mRNA_4502: 12870 - KOG3720 Lysosomal & prostatic acid phosphatases, at 332,888 to 334,792 12870 mRNA_4503: 12871 - K12397 AP3B AP-3 complex subunit beta, at 335,099 to 337,846 12871 mRNA_4504: 12872 - Hypothetical Protein, at 338,393 to 338,917 12872 mRNA_4505: 12873 - K18172 CMC2 COX assembly mitochondrial protein 2, at 338,981 to 339,395 12873
Group Condition mRNA_4501 mRNA_4502 mRNA_4503 mRNA_4504 mRNA_4505
12869 12870 12871 12872 12873
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.0 -2.0 -0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -0.3 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 +0.0 -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -0.3 +0.3 -0.1
growth on ypd YPD +0.0 +0.0 -0.7 -0.5 +0.7
growth on oleic acid YNB Oleic Acid +0.4 +0.1 +0.0 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.6 +0.2 +0.6
growth on oleic acid YNB Glucose +0.2 +0.3 -0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.0 +0.5 -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 +0.3 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 +0.0 +0.1 +0.2
auxotrophy Dropout Complete +0.3 +0.1 -0.2 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.1 +0.6 +0.0
auxotrophy YNB Glucose +0.3 +0.1 +0.5 -0.3 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 -0.3 +0.7 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.5 +1.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.5 +0.9 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 +0.4 -0.1 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.3 +0.8 +0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 +0.7 +0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.3 -0.1 +1.3 +0.7
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