Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12874 and 12875 are separated by 258 nucleotides12875 and 12876 are separated by 308 nucleotides12876 and 12877 are separated by 122 nucleotides12877 and 12878 are separated by 689 nucleotides mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339,394 to 340,797 12874 mRNA_4507: 12875 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 341,056 to 342,749 12875 mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343,058 to 345,136 12876 mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345,259 to 347,501 12877 mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348,191 to 349,956 12878
Group Condition mRNA_4506 mRNA_4507 mRNA_4508 mRNA_4509 mRNA_4510
12874 12875 12876 12877 12878
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.4 -0.7 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.4 -0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.4 +0.1 +0.8 -0.4
growth on ypd YPD -0.4 +0.2 -0.1 -0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.0 +0.3 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 +0.1 -0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.8 +0.1 +0.3 +0.5
growth on oleic acid YNB Oleic Acid -0.7 +0.0 +0.2 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 +0.1 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.0 +0.2 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 +0.2 -0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 +0.2 +0.2 -0.8 -0.2
growth on oleic acid YNB Glucose -0.1 -0.3 +0.2 +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.3 +0.1 +0.0 -0.4
auxotrophy Dropout Complete -0.3 -0.1 +0.4 +0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.1 +0.3 +0.9 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 +0.5 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.2 +0.9 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.1 +0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 +0.5 +1.2 -0.5
auxotrophy YNB Glucose +0.1 +0.2 +0.5 +0.8 -0.1
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