Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12875 and 12876 are separated by 308 nucleotides
12876 and 12877 are separated by 122 nucleotides
12877 and 12878 are separated by 689 nucleotides
12878 and 12879 are separated by 1443 nucleotides
mRNA_4507: 12875 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 341,056 to 342,749
12875
mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343,058 to 345,136
12876
mRNA_4509: 12877 - HMMPfam-Ctr copper transporter family-PF04145, at 345,259 to 347,501
12877
mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348,191 to 349,956
12878
mRNA_4511: 12879 - Hypothetical Protein, at 351,400 to 352,761
12879
Group
Condition
mRNA
_4507
mRNA
_4508
mRNA
_4509
mRNA
_4510
mRNA
_4511
12875
12876
12877
12878
12879
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.4
-0.1
-0.8
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.7
+0.2
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
-0.8
-0.2
+0.0
growth on ypd
YPD
+0.2
-0.1
-0.6
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.5
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
+0.1
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.3
-0.4
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
+0.1
+0.3
+0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.1
+0.0
-0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
-0.4
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.1
+0.8
-0.4
+0.0
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
+0.4
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.3
+0.2
+0.4
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.2
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.5
+0.2
-0.3
-0.1
auxotrophy
Dropout Complete
-0.1
+0.4
+0.7
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
+0.6
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.9
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.5
+1.2
-0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.9
-0.0
-0.1
auxotrophy
YNB Glucose
+0.2
+0.5
+0.8
-0.1
-0.1
remove
mRNA_4507
plot
remove
mRNA_4508
plot
remove
mRNA_4509
remove
mRNA_4510
plot
remove
mRNA_4511
plot