Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12878 and 12879 are separated by 1443 nucleotides12879 and 12880 are separated by 432 nucleotides12880 and 12881 are separated by 417 nucleotides12881 and 12882 are separated by 207 nucleotides mRNA_4510: 12878 - KOG0627 Heat shock transcription factor, at 348,191 to 349,956 12878 mRNA_4511: 12879 - Hypothetical Protein, at 351,400 to 352,761 12879 mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353,194 to 354,896 12880 mRNA_4513: 12881 - K00981 E2.7.7.41, CDS1, CDS2, cdsA phosphatidate cytidylyltransferase, at 355,314 to 357,879 12881 mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358,087 to 360,216 12882
Group Condition mRNA_4510 mRNA_4511 mRNA_4512 mRNA_4513 mRNA_4514
12878 12879 12880 12881 12882
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.1 -0.6 N.D. -2.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 -0.6 N.D. -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 +0.1 N.D. -1.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 +0.2 N.D. -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 -0.4 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 -0.1 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 +0.2 N.D. -0.4
auxotrophy Dropout Complete -0.3 -0.1 +0.3 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.0 +0.6 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 +0.0 N.D. -0.3
growth on oleic acid YNB Glucose +0.1 -0.2 -0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.1 N.D. +0.2
growth on ypd YPD -0.0 +0.1 -0.2 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 +0.1 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.2 N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.1 N.D. +1.0
auxotrophy YNB Glucose -0.1 -0.1 +0.2 N.D. +0.6
growth on ricinoleic acid YNB Glucose +0.0 +0.0 +0.7 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.0 +0.7 N.D. +1.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.1 +0.6 N.D. +1.4
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