Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12880 and 12881 are separated by 417 nucleotides12881 and 12882 are separated by 207 nucleotides12882 and 12883 are separated by 432 nucleotides12883 and 12884 are separated by 79 nucleotides mRNA_4512: 12880 - KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain, at 353,194 to 354,896 12880 mRNA_4513: 12881 - K00981 E2.7.7.41, CDS1, CDS2, cdsA phosphatidate cytidylyltransferase, at 355,314 to 357,879 12881 mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358,087 to 360,216 12882 mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360,649 to 361,233 12883 mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361,313 to 361,864 12884
Group Condition mRNA_4512 mRNA_4513 mRNA_4514 mRNA_4515 mRNA_4516
12880 12881 12882 12883 12884
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -2.1 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -1.0 -1.8 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -1.4 -0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. -0.5 -0.9 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.4 -1.4 -0.0
auxotrophy Dropout Complete +0.3 N.D. -0.6 -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.3 -0.7 -0.1
growth on oleic acid YNB Glucose -0.2 N.D. +0.0 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 N.D. -0.6 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. -0.9 +0.9 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.4 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.3 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.3 +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.2 -0.1 +0.1
growth on ypd YPD -0.2 N.D. +0.2 +0.5 -0.2
growth on ricinoleic acid YNB Glucose +0.7 N.D. +0.3 -0.8 +0.1
auxotrophy YNB Glucose +0.2 N.D. +0.6 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. +1.0 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.5 +0.7 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. +1.4 -0.8 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. +1.4 -0.1 +0.2
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