Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12881 and 12882 are separated by 207 nucleotides12882 and 12883 are separated by 432 nucleotides12883 and 12884 are separated by 79 nucleotides12884 and 12885 are separated by 4366 nucleotides mRNA_4513: 12881 - K00981 E2.7.7.41, CDS1, CDS2, cdsA phosphatidate cytidylyltransferase, at 355,314 to 357,879 12881 mRNA_4514: 12882 - K03241 EIF2B3 translation initiation factor eIF-2B subunit gamma, at 358,087 to 360,216 12882 mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360,649 to 361,233 12883 mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361,313 to 361,864 12884 mRNA_4517: 12885 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 366,231 to 367,464 12885
Group Condition mRNA_4513 mRNA_4514 mRNA_4515 mRNA_4516 mRNA_4517
12881 12882 12883 12884 12885
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -2.1 -0.9 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.0 -1.8 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.4 -0.5 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 -1.4 -0.0 N.D.
auxotrophy Dropout Complete N.D. -0.6 -0.9 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.9 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 -0.2 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.7 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.8 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 -0.3 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 +0.3 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 +0.9 +0.3 N.D.
auxotrophy YNB Glucose N.D. +0.6 -0.2 -0.1 N.D.
growth on ypd YPD N.D. +0.2 +0.5 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +1.0 -0.2 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.4 -0.8 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.7 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.4 -0.1 +0.2 N.D.
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