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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12883 and 12884 are separated by 79 nucleotides
12884 and 12885 are separated by 4366 nucleotides
12885 and 12886 are separated by 1815 nucleotides
12886 and 12887 are separated by 979 nucleotides
mRNA_4515: 12883 - SUPERFAMILY--SSF51735, at 360,649 to 361,233
12883
mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361,313 to 361,864
12884
mRNA_4517: 12885 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 366,231 to 367,464
12885
mRNA_4518: 12886 - Hypothetical Protein, at 369,280 to 370,567
12886
mRNA_4519: 12887 - Hypothetical Protein, at 371,547 to 373,000
12887
Group
Condition
mRNA
_4515
mRNA
_4516
mRNA
_4517
mRNA
_4518
mRNA
_4519
12883
12884
12885
12886
12887
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
N.D.
-1.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-1.4
-0.0
N.D.
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.8
-0.0
N.D.
+0.4
-0.2
growth on ypd
YPD
+0.5
-0.2
N.D.
-1.7
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
N.D.
-1.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
-0.0
N.D.
+0.1
-0.4
growth on oleic acid
YNB Glucose
-0.3
+0.1
N.D.
-1.0
-0.0
auxotrophy
Dropout Complete
-0.9
-0.2
N.D.
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
-0.8
+0.1
N.D.
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
N.D.
-0.9
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+0.2
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose
-0.2
-0.1
N.D.
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
-0.1
N.D.
+0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-0.1
N.D.
+0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
+0.3
N.D.
-1.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.3
N.D.
+0.8
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.0
N.D.
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
N.D.
+0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
N.D.
+0.7
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.7
+0.2
N.D.
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
N.D.
+1.0
+0.3
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