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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12884 and 12885 are separated by 4366 nucleotides
12885 and 12886 are separated by 1815 nucleotides
12886 and 12887 are separated by 979 nucleotides
12887 and 12888 are separated by 887 nucleotides
mRNA_4516: 12884 - BLAST ketoreductase [Coccidioides immitis RS], at 361,313 to 361,864
12884
mRNA_4517: 12885 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 366,231 to 367,464
12885
mRNA_4518: 12886 - Hypothetical Protein, at 369,280 to 370,567
12886
mRNA_4519: 12887 - Hypothetical Protein, at 371,547 to 373,000
12887
mRNA_4520: 12888 - Hypothetical Protein, at 373,888 to 374,415
12888
Group
Condition
mRNA
_4516
mRNA
_4517
mRNA
_4518
mRNA
_4519
mRNA
_4520
12884
12885
12886
12887
12888
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
N.D.
-0.9
-0.1
-2.3
growth on ypd
YPD
-0.2
N.D.
-1.7
-0.3
-0.7
growth on oleic acid
YNB Oleic Acid
-0.0
N.D.
-1.1
+0.1
-1.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-1.1
+0.0
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-1.1
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
N.D.
+0.1
-0.4
-1.2
growth on oleic acid
YNB Glucose
+0.1
N.D.
-1.0
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
N.D.
-0.4
+0.0
-0.5
auxotrophy
YNB Glucose
-0.1
N.D.
-0.3
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
N.D.
+0.1
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
+0.4
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.2
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
+0.3
+0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
-0.1
+0.2
+0.2
auxotrophy
Dropout Complete
-0.2
N.D.
-0.2
+0.1
+0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.4
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
+0.2
-0.0
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.3
+0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
+0.7
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
+1.0
+0.3
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
N.D.
+0.8
+0.2
+1.2
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