Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12889 and 12890 are separated by 127 nucleotides12890 and 12891 are separated by 27 nucleotides12891 and 12892 are separated by 405 nucleotides12892 and 12893 are separated by 460 nucleotides mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374,666 to 375,210 12889 mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375,338 to 377,134 12890 mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377,162 to 379,234 12891 mRNA_4524: 12892 - Hypothetical Protein, at 379,640 to 380,547 12892 mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381,008 to 382,487 12893
Group Condition mRNA_4521 mRNA_4522 mRNA_4523 mRNA_4524 mRNA_4525
12889 12890 12891 12892 12893
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.8 +0.3 -0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 -0.1 +0.6 +0.8 -0.4
auxotrophy Dropout Complete -0.2 +0.0 +0.1 -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 +0.3 +0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.3 +0.1 +0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.6 +0.0 +0.2 -0.6
auxotrophy YNB Glucose -0.3 +0.6 +0.0 +0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 +0.1 +0.2 -0.1
growth on ypd YPD +0.3 +0.3 +0.5 -0.3 -0.4
growth on ricinoleic acid YNB Glucose +0.2 -0.0 +0.6 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.5 +0.5 +0.1 -0.5
growth on oleic acid YNB Glucose +0.2 +0.2 +0.1 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.0 +0.5 +0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.8 +0.5 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.5 +0.5 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 +0.7 +0.0 +0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.4 +0.1 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.4 +0.1 +0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.1 -0.0 +0.4 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.5 +0.8 +0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.3 +0.4 +1.0 +0.3
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