Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12890 and 12891 are separated by 27 nucleotides12891 and 12892 are separated by 405 nucleotides12892 and 12893 are separated by 460 nucleotides12893 and 12894 are separated by 256 nucleotides mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375,338 to 377,134 12890 mRNA_4523: 12891 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 377,162 to 379,234 12891 mRNA_4524: 12892 - Hypothetical Protein, at 379,640 to 380,547 12892 mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381,008 to 382,487 12893 mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382,744 to 384,550 12894
Group Condition mRNA_4522 mRNA_4523 mRNA_4524 mRNA_4525 mRNA_4526
12890 12891 12892 12893 12894
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +0.3 -0.5 +0.2 -0.0
auxotrophy Dropout Complete +0.0 +0.1 -0.2 -0.6 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.6 +0.8 -0.4 -0.8
growth on ypd YPD +0.3 +0.5 -0.3 -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 +0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.5 +0.3 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.5 +0.1 -0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.0 +0.2 -0.6 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.1 +0.2 -0.1 +0.0
auxotrophy YNB Glucose +0.6 +0.0 +0.2 -0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.6 +0.1 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 +0.4 -0.2 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.5 +0.2 +0.3 -0.6
growth on oleic acid YNB Glucose +0.2 +0.1 +0.4 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.1 +0.5 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.7 +0.0 +0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.4 +0.1 +0.4 +0.1 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 +0.4 +0.4 +0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.4 +1.0 +0.3 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.8 +0.3 -0.0 +1.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 +0.5 +0.1 +0.4 +1.2
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