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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12892 and 12893 are separated by 460 nucleotides
12893 and 12894 are separated by 256 nucleotides
12894 and 12895 are separated by 262 nucleotides
12895 and 12896 are separated by 509 nucleotides
mRNA_4524: 12892 - Hypothetical Protein, at 379,640 to 380,547
12892
mRNA_4525: 12893 - KOG0143 Iron/ascorbate family oxidoreductases, at 381,008 to 382,487
12893
mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382,744 to 384,550
12894
mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384,813 to 386,229
12895
mRNA_4528: 12896 - Hypothetical Protein, at 386,739 to 388,320
12896
Group
Condition
mRNA
_4524
mRNA
_4525
mRNA
_4526
mRNA
_4527
mRNA
_4528
12892
12893
12894
12895
12896
auxotrophy
Dropout Complete
-0.2
-0.6
+0.4
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.2
-0.0
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
+0.0
-0.8
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.6
+0.2
-0.6
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.3
-0.2
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.3
-0.6
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.1
+0.1
-0.6
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.2
-0.0
-0.1
-0.5
auxotrophy
YNB Glucose
+0.2
-0.4
+0.2
-0.7
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.5
-0.3
+0.3
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.4
-0.0
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.1
+0.0
-0.4
+0.2
growth on oleic acid
YNB Glucose
+0.4
-0.1
+0.3
-0.1
-0.2
growth on ypd
YPD
-0.3
-0.4
-0.0
+0.2
+1.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.0
+1.1
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
+0.4
+0.1
+0.6
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.2
+0.8
+0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.4
+1.2
-0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
-0.4
-0.8
+1.8
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
+0.4
+0.8
-0.6
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.0
+0.3
+0.6
+0.5
-0.3
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