Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12894 and 12895 are separated by 262 nucleotides12895 and 12896 are separated by 509 nucleotides12896 and 12897 are separated by 801 nucleotides12897 and 12898 are separated by 2225 nucleotides mRNA_4526: 12894 - K12446 E2.7.1.46 L-arabinokinase, at 382,744 to 384,550 12894 mRNA_4527: 12895 - SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 384,813 to 386,229 12895 mRNA_4528: 12896 - Hypothetical Protein, at 386,739 to 388,320 12896 mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389,122 to 390,984 12897 mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393,210 to 395,082 12898
Group Condition mRNA_4526 mRNA_4527 mRNA_4528 mRNA_4529 mRNA_4530
12894 12895 12896 12897 12898
growth on ricinoleic acid YNB Methylricinoleic Acid +1.1 -0.3 -0.2 -0.3 -3.0
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.8 -0.2 -0.3 -0.3
auxotrophy Dropout Complete +0.4 -0.4 -0.5 -0.2 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.4 +0.2 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 -0.4 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 -0.5 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.4 -0.1 +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.6 +0.1 -0.4 -0.2
growth on oleic acid YNB Glucose +0.3 -0.1 -0.2 -0.1 -0.7
growth on ricinoleic acid YNB Glucose +0.1 -0.6 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 -0.4 +0.1 -0.1 -1.4
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 +0.0 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 -0.1 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.8 +0.3 -0.3 -0.4 -0.8
growth on oleic acid YNB Oleic Acid +0.6 -0.1 -0.0 -0.3 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.8 -0.6 +0.3 -0.3 -0.5
auxotrophy YNB Glucose +0.2 -0.7 +0.4 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.3 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +1.8 -0.0 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.5 -0.3 -0.5 +0.4
growth on ypd YPD -0.0 +0.2 +1.3 +0.6 +0.2
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