Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12896 and 12897 are separated by 801 nucleotides12897 and 12898 are separated by 2225 nucleotides12898 and 12899 are separated by 92 nucleotides12899 and 12900 are separated by 329 nucleotides mRNA_4528: 12896 - Hypothetical Protein, at 386,739 to 388,320 12896 mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389,122 to 390,984 12897 mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393,210 to 395,082 12898 mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395,175 to 396,195 12899 mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973 12900
Group Condition mRNA_4528 mRNA_4529 mRNA_4530 mRNA_4531 mRNA_4532
12896 12897 12898 12899 12900
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 -3.0 -0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -1.4 -0.1 -0.9
auxotrophy Dropout Complete -0.5 -0.2 -0.7 -0.4 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.5 +0.4 -0.1 -1.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.8 -0.1 -0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.7 -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.3 -0.5 -1.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 -0.5 +0.0 -1.1
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.5 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.0 -0.1 -0.1 -0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 -0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.5 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 -0.2 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 -0.8 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.1 -0.3 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 -0.1 +0.3 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.4 +0.6 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.2 -0.1 +0.3
auxotrophy YNB Glucose +0.4 +0.2 +0.2 -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.3 +0.2 +0.4
growth on ypd YPD +1.3 +0.6 +0.2 -0.9 -0.3
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