Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12897 and 12898 are separated by 2225 nucleotides12898 and 12899 are separated by 92 nucleotides12899 and 12900 are separated by 329 nucleotides12900 and 12901 are separated by 200 nucleotides mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389,122 to 390,984 12897 mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393,210 to 395,082 12898 mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395,175 to 396,195 12899 mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973 12900 mRNA_4533: 12901 - Hypothetical Protein, at 398,174 to 399,920 12901
Group Condition mRNA_4529 mRNA_4530 mRNA_4531 mRNA_4532 mRNA_4533
12897 12898 12899 12900 12901
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -3.0 -0.3 -0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.4 -0.1 -1.7 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.5 -1.0 -0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.4 -0.1 -0.9 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.8 -0.1 -0.2 -0.4
auxotrophy Dropout Complete -0.2 -0.7 -0.4 -0.6 -0.0
growth on oleic acid YNB Glucose -0.1 -0.7 -0.2 -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 +0.0 -1.1 -0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.5 -0.2 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -0.0 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.8 +0.1 +0.3 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 +0.1 -0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 -0.0 -0.4 +0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.1 -0.6 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.1 +0.3 -0.5 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.1 +0.3 -0.1
growth on ypd YPD +0.6 +0.2 -0.9 -0.3 +0.3
auxotrophy YNB Glucose +0.2 +0.2 -0.0 -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4 +0.6 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 +0.5 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 +0.2 +0.4 +0.2
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