Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12898 and 12899 are separated by 92 nucleotides12899 and 12900 are separated by 329 nucleotides12900 and 12901 are separated by 200 nucleotides12901 and 12902 are separated by 397 nucleotides mRNA_4530: 12898 - K00605 gcvT, AMT aminomethyltransferase, at 393,210 to 395,082 12898 mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395,175 to 396,195 12899 mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973 12900 mRNA_4533: 12901 - Hypothetical Protein, at 398,174 to 399,920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400,318 to 402,345 12902
Group Condition mRNA_4530 mRNA_4531 mRNA_4532 mRNA_4533 mRNA_4534
12898 12899 12900 12901 12902
growth on ricinoleic acid YNB Methylricinoleic Acid -3.0 -0.3 -0.5 +0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -1.0 -0.1 -0.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.1 -1.7 -0.9 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.0 -1.1 -0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.1 -0.9 +0.1 +0.3
auxotrophy Dropout Complete -0.7 -0.4 -0.6 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.1 -0.2 -0.4 -0.0
growth on oleic acid YNB Glucose -0.7 -0.2 -0.4 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.5 -0.2 -0.3 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.0 -0.4 +0.1 -0.0
growth on ypd YPD +0.2 -0.9 -0.3 +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 -0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 -0.5 -0.8 +0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.6 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.1 +0.3 -0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.4 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.3 -0.1 -0.1
auxotrophy YNB Glucose +0.2 -0.0 -0.4 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.6 +0.3 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.5 +0.0 -0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 +0.4 +0.2 -0.2
remove
mRNA_4530
plot
remove
mRNA_4531
plot
remove
mRNA_4532
remove
mRNA_4533
plot
remove
mRNA_4534
plot