Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12899 and 12900 are separated by 329 nucleotides
12900 and 12901 are separated by 200 nucleotides
12901 and 12902 are separated by 397 nucleotides
12902 and 12903 are separated by 422 nucleotides
mRNA_4531: 12899 - K03671 trxA thioredoxin 1, at 395,175 to 396,195
12899
mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973
12900
mRNA_4533: 12901 - Hypothetical Protein, at 398,174 to 399,920
12901
mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400,318 to 402,345
12902
mRNA_4535: 12903 - Hypothetical Protein, at 402,768 to 403,548
12903
Group
Condition
mRNA
_4531
mRNA
_4532
mRNA
_4533
mRNA
_4534
mRNA
_4535
12899
12900
12901
12902
12903
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.7
-0.9
+0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.1
-0.6
-0.1
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-1.1
-0.0
-0.5
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.4
-0.3
+0.3
-0.5
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.2
+0.0
-0.4
auxotrophy
Dropout Complete
-0.4
-0.6
-0.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.5
-0.8
+0.5
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.4
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.9
+0.1
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.4
+0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.6
+0.1
+0.1
+0.2
growth on ypd
YPD
-0.9
-0.3
+0.3
-0.1
+0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.3
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.4
+0.0
+0.1
-0.1
auxotrophy
YNB Glucose
-0.0
-0.4
-0.0
+0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
-0.5
+0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.4
+0.2
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.5
+0.2
+0.3
+0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.3
-0.3
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.0
-0.1
+0.5
+0.1
remove
mRNA_4531
plot
remove
mRNA_4532
plot
remove
mRNA_4533
remove
mRNA_4534
plot
remove
mRNA_4535
plot