Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12900 and 12901 are separated by 200 nucleotides12901 and 12902 are separated by 397 nucleotides12902 and 12903 are separated by 422 nucleotides12903 and 12904 are separated by 580 nucleotides mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973 12900 mRNA_4533: 12901 - Hypothetical Protein, at 398,174 to 399,920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400,318 to 402,345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402,768 to 403,548 12903 mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404,129 to 405,942 12904
Group Condition mRNA_4532 mRNA_4533 mRNA_4534 mRNA_4535 mRNA_4536
12900 12901 12902 12903 12904
facs on lipid accumulation Sorted Low BODIPY Gate -1.7 -0.9 +0.1 -0.6 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 -0.0 -0.5 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 -0.1 -0.9 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.8 +0.5 -0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.0 -0.4 +0.0
growth on oleic acid YNB Glucose -0.4 -0.3 +0.3 -0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.6 +0.1 +0.1 +0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.5 +0.2 +0.0 -0.4
auxotrophy Dropout Complete -0.6 -0.0 +0.1 +0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4 -0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 +0.1 -0.1 +0.2
auxotrophy YNB Glucose -0.4 -0.0 +0.4 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 -0.0 -0.0 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 -0.1 -0.1 +0.1
growth on ypd YPD -0.3 +0.3 -0.1 +0.6 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 +0.1 +0.3 +0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.2 +0.3 +0.7 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 +0.1 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.2 -0.2 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.5 +0.1 +0.2
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