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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12900 and 12901 are separated by 200 nucleotides
12901 and 12902 are separated by 397 nucleotides
12902 and 12903 are separated by 422 nucleotides
12903 and 12904 are separated by 580 nucleotides
mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396,525 to 397,973
12900
mRNA_4533: 12901 - Hypothetical Protein, at 398,174 to 399,920
12901
mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400,318 to 402,345
12902
mRNA_4535: 12903 - Hypothetical Protein, at 402,768 to 403,548
12903
mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404,129 to 405,942
12904
Group
Condition
mRNA
_4532
mRNA
_4533
mRNA
_4534
mRNA
_4535
mRNA
_4536
12900
12901
12902
12903
12904
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
-0.9
+0.1
-0.6
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.0
-0.5
-0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.6
-0.1
-0.9
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.8
+0.5
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
+0.0
-0.4
+0.0
growth on oleic acid
YNB Glucose
-0.4
-0.3
+0.3
-0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.6
+0.1
+0.1
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
+0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.5
+0.2
+0.0
-0.4
auxotrophy
Dropout Complete
-0.6
-0.0
+0.1
+0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.4
-0.0
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
+0.1
-0.1
+0.2
auxotrophy
YNB Glucose
-0.4
-0.0
+0.4
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.1
-0.0
-0.0
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.1
-0.1
+0.1
growth on ypd
YPD
-0.3
+0.3
-0.1
+0.6
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.1
+0.3
+0.1
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.2
+0.3
+0.7
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.3
+0.1
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.2
-0.2
-0.4
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
+0.5
+0.1
+0.2
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mRNA_4532
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mRNA_4533
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mRNA_4534
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mRNA_4535
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mRNA_4536
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