Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12902 and 12903 are separated by 422 nucleotides12903 and 12904 are separated by 580 nucleotides12904 and 12905 are separated by 375 nucleotides12905 and 12906 are separated by 139 nucleotides mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400,318 to 402,345 12902 mRNA_4535: 12903 - Hypothetical Protein, at 402,768 to 403,548 12903 mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404,129 to 405,942 12904 mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406,318 to 409,422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409,562 to 410,663 12906
Group Condition mRNA_4534 mRNA_4535 mRNA_4536 mRNA_4537 mRNA_4538
12902 12903 12904 12905 12906
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.1 +0.0 +0.1 -1.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.6 +0.5 +0.4 -1.5
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.9 +0.3 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 +0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.0 -0.2 -0.7 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 +0.2 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 +0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.4 +0.0 +0.0 +0.5
auxotrophy Dropout Complete +0.1 +0.2 +0.1 -0.2 +0.2
growth on oleic acid YNB Glucose +0.3 -0.5 +0.1 +0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +0.5 +0.0 -0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.1 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.1 +0.2 +0.2 -0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.0 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.0 -0.4 -0.0 +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 +0.1 -0.3 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.7 -0.5 +0.4 +0.1
auxotrophy YNB Glucose +0.4 -0.1 -0.0 +0.2 +0.7
growth on ypd YPD -0.1 +0.6 -0.4 +0.3 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.1 +0.2 +0.3 +1.3
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