Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12903 and 12904 are separated by 580 nucleotides12904 and 12905 are separated by 375 nucleotides12905 and 12906 are separated by 139 nucleotides12906 and 12907 are separated by 80 nucleotides mRNA_4535: 12903 - Hypothetical Protein, at 402,768 to 403,548 12903 mRNA_4536: 12904 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 404,129 to 405,942 12904 mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406,318 to 409,422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409,562 to 410,663 12906 mRNA_4539: 12907 - HMMPfam-DNA polymerase subunit Cdc27-PF09507, at 410,744 to 412,303 12907
Group Condition mRNA_4535 mRNA_4536 mRNA_4537 mRNA_4538 mRNA_4539
12903 12904 12905 12906 12907
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.0 +0.1 -1.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.5 +0.4 -1.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.9 +0.3 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.7 +0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.3 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.5 +0.0 -0.6 N.D.
growth on oleic acid YNB Glucose -0.5 +0.1 +0.0 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.0 +0.0 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.5 -0.1 -0.1 N.D.
auxotrophy Dropout Complete +0.2 +0.1 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.4 -0.0 +0.8 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 +0.2 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 -0.5 +0.4 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.0 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 -0.3 +0.8 N.D.
auxotrophy YNB Glucose -0.1 -0.0 +0.2 +0.7 N.D.
growth on ypd YPD +0.6 -0.4 +0.3 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.3 +1.3 N.D.
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