Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12905 and 12906 are separated by 139 nucleotides12906 and 12907 are separated by 80 nucleotides12907 and 12908 are separated by 181 nucleotides12908 and 12909 are separated by 873 nucleotides mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406,318 to 409,422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409,562 to 410,663 12906 mRNA_4539: 12907 - HMMPfam-DNA polymerase subunit Cdc27-PF09507, at 410,744 to 412,303 12907 mRNA_4540: 12908 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 412,485 to 416,287 12908 mRNA_4541: 12909 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 417,161 to 419,747 12909
Group Condition mRNA_4537 mRNA_4538 mRNA_4539 mRNA_4540 mRNA_4541
12905 12906 12907 12908 12909
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.8 N.D. -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 N.D. -0.6 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. -0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.6 N.D. +0.4 -0.0
auxotrophy Dropout Complete -0.2 +0.2 N.D. +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 N.D. -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.8 N.D. -0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 N.D. -0.7 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -1.5 N.D. -0.4 +1.6
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.6 N.D. +0.4 -0.0
growth on ricinoleic acid YNB Glucose +0.4 +0.0 N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.8 N.D. -0.0 +0.1
growth on oleic acid YNB Glucose +0.0 +0.4 N.D. -0.1 +0.2
auxotrophy YNB Glucose +0.2 +0.7 N.D. +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +1.3 N.D. -0.8 -0.1
growth on oleic acid YNB Oleic Acid +0.0 +0.5 N.D. +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 N.D. +0.6 -0.1
growth on ypd YPD +0.3 +0.7 N.D. -0.3 +0.5
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