Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12909 and 12910 are separated by 1002 nucleotides12910 and 12911 are separated by 248 nucleotides12911 and 12912 are separated by 986 nucleotides12912 and 12913 are separated by 708 nucleotides mRNA_4541: 12909 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 417,161 to 419,747 12909 mRNA_4542: 12910 - K05302 SETD6 N-lysine methyltransferase SETD6, at 420,750 to 422,529 12910 mRNA_4543: 12911 - HMMPfam-Rrp15p-PF07890, at 422,778 to 423,805 12911 mRNA_4544: 12912 - K01251 E3.3.1.1, ahcY adenosylhomocysteinase, at 424,792 to 427,173 12912 mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427,882 to 428,716 12913
Group Condition mRNA_4541 mRNA_4542 mRNA_4543 mRNA_4544 mRNA_4545
12909 12910 12911 12912 12913
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.1 -0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.2 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.2 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.5 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.8 N.D. N.D. N.D.
growth on ypd YPD +0.5 +0.4 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.6 +0.3 N.D. N.D. N.D.
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