Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12913 and 12914 are separated by 286 nucleotides12914 and 12915 are separated by 1213 nucleotides12915 and 12916 are separated by 380 nucleotides12916 and 12917 are separated by 682 nucleotides mRNA_4545: 12913 - K11088 SNRPD3, SMD3 small nuclear ribonucleoprotein D3, at 427,882 to 428,716 12913 mRNA_4546: 12914 - K16576 ACTR10, ARP11 actin-related protein 10, at 429,003 to 431,242 12914 mRNA_4547: 12915 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 432,456 to 433,199 12915 mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433,580 to 435,269 12916 mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435,952 to 437,989 12917
Group Condition mRNA_4545 mRNA_4546 mRNA_4547 mRNA_4548 mRNA_4549
12913 12914 12915 12916 12917
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.5 -0.9 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -2.1 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.8 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -1.4 -0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.1 -0.6 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.3 -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.0 +0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.4 +0.2 +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.6 -0.5 +0.0
growth on ypd YPD N.D. N.D. +0.7 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.0 +0.2 +0.2
auxotrophy Dropout Complete N.D. N.D. +0.0 +0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.1 +0.3 +0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.6 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.4 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.7 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +1.1 -0.1 +0.1
auxotrophy YNB Glucose N.D. N.D. +1.0 +0.5 +0.3
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