Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12916 and 12917 are separated by 682 nucleotides12917 and 12918 are separated by 93 nucleotides12918 and 12919 are separated by 231 nucleotides12919 and 12920 are separated by 425 nucleotides mRNA_4548: 12916 - K03392 ACMSD aminocarboxymuconate-semialdehyde decarboxylase, at 433,580 to 435,269 12916 mRNA_4549: 12917 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 435,952 to 437,989 12917 mRNA_4550: 12918 - K16186 RRAGC_D Ras-related GTP-binding protein C/D, at 438,083 to 440,152 12918 mRNA_4551: 12919 - HMMPfam-Whi5 like-PF08528, at 440,384 to 442,291 12919 mRNA_4552: 12920 - KOG2263 Methionine synthase II (cobalamin-independent), at 442,717 to 444,581 12920
Group Condition mRNA_4548 mRNA_4549 mRNA_4550 mRNA_4551 mRNA_4552
12916 12917 12918 12919 12920
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.0 -0.7 +0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.8 -0.4 -0.1 +0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.5 +0.0 -0.2 +0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.7 +0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 -0.4 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 -0.3 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.3 +0.4 -0.1 -0.0
growth on ypd YPD -0.2 -0.2 -0.3 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 +0.2 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 -0.3 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 -0.1 -0.0 -0.1
growth on oleic acid YNB Glucose -0.0 +0.2 -0.4 +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 +0.1 +0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 +0.0 +0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 -0.5 +0.5 -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.2 -0.4 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 -0.3 +0.5 -0.2
auxotrophy YNB Glucose +0.5 +0.3 -0.2 +0.6 -0.6
auxotrophy Dropout Complete +0.4 +0.0 -0.1 +0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.1 +0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.2 +0.7 +0.4 -0.1
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