Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12918 and 12919 are separated by 231 nucleotides12919 and 12920 are separated by 425 nucleotides12920 and 12921 are separated by 948 nucleotides12921 and 12922 are separated by 122 nucleotides mRNA_4550: 12918 - K16186 RRAGC_D Ras-related GTP-binding protein C/D, at 438,083 to 440,152 12918 mRNA_4551: 12919 - HMMPfam-Whi5 like-PF08528, at 440,384 to 442,291 12919 mRNA_4552: 12920 - KOG2263 Methionine synthase II (cobalamin-independent), at 442,717 to 444,581 12920 mRNA_4553: 12921 - SUPERFAMILY--SSF81383, at 445,530 to 447,635 12921 mRNA_4554: 12922 - K12585 DIS3, RRP44 exosome complex exonuclease DIS3/RRP44, at 447,758 to 451,562 12922
Group Condition mRNA_4550 mRNA_4551 mRNA_4552 mRNA_4553 mRNA_4554
12918 12919 12920 12921 12922
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 -0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.1 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.2 -0.4 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.0 +0.2 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 -0.4 +0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.3 -0.5 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 +0.0 -0.0 N.D.
auxotrophy YNB Glucose -0.2 +0.6 -0.6 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.5 -0.1 -0.1 N.D.
growth on oleic acid YNB Glucose -0.4 +0.1 +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.5 -0.2 -0.1 N.D.
auxotrophy Dropout Complete -0.1 +0.5 -0.3 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.2 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.0 +0.2 N.D.
growth on ypd YPD -0.3 +0.3 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.1 -0.0 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.5 -0.0 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.2 -0.0 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.4 -0.1 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.5 +0.1 +0.4 N.D.
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