Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12921 and 12922 are separated by 122 nucleotides12922 and 12923 are separated by 639 nucleotides12923 and 12924 are separated by 163 nucleotides12924 and 12925 are separated by 62 nucleotides mRNA_4553: 12921 - SUPERFAMILY--SSF81383, at 445,530 to 447,635 12921 mRNA_4554: 12922 - K12585 DIS3, RRP44 exosome complex exonuclease DIS3/RRP44, at 447,758 to 451,562 12922 mRNA_4555: 12923 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 452,202 to 455,003 12923 mRNA_4556: 12924 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 455,167 to 456,572 12924 mRNA_4557: 12925 - KOG3318 Predicted membrane protein, at 456,635 to 457,680 12925
Group Condition mRNA_4553 mRNA_4554 mRNA_4555 mRNA_4556 mRNA_4557
12921 12922 12923 12924 12925
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.5 -0.7 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.0 -2.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.1 -0.6 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. -0.2 -0.5 -0.3
auxotrophy Dropout Complete -0.3 N.D. -0.1 -0.8 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.6 -0.8 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.1 -0.8 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.2 -1.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.1 -0.5 -0.2
growth on oleic acid YNB Glucose +0.0 N.D. -0.4 -0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. -0.3 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.1 -0.8 +0.2
growth on ypd YPD +0.3 N.D. +0.3 -0.8 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 -0.2 -0.0
auxotrophy YNB Glucose +0.1 N.D. -0.1 -0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 -0.4 +0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.2 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. +0.4 -0.7 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.2 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.3 +0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. -0.0 +0.5 -0.2
remove
mRNA_4553
plot
remove
mRNA_4554
plot
remove
mRNA_4555
remove
mRNA_4556
plot
remove
mRNA_4557
plot