Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12926 and 12927 are separated by 974 nucleotides12927 and 12928 are separated by 558 nucleotides12928 and 12929 are separated by 208 nucleotides12929 and 12930 are separated by 495 nucleotides mRNA_4558: 12926 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 457,914 to 459,915 12926 mRNA_4559: 12927 - HMMPfam-PAP2 superfamily-PF01569,SMART-Acid phosphatase homologues-SM00014,SUPERFAMILY--SSF48317, at 460,890 to 462,526 12927 mRNA_4560: 12928 - Hypothetical Protein, at 463,085 to 464,279 12928 mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464,488 to 466,003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466,499 to 468,748 12930
Group Condition mRNA_4558 mRNA_4559 mRNA_4560 mRNA_4561 mRNA_4562
12926 12927 12928 12929 12930
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. -1.3 -1.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. -0.5 -1.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 N.D. -0.3 -1.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.5 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. +0.4 -1.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.5 -0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. -0.4 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.6 +0.2 -0.4
auxotrophy Dropout Complete +0.0 N.D. -0.2 +0.3 -0.6
growth on oleic acid YNB Oleic Acid -0.4 N.D. +0.1 +0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.0 -0.1 -0.3
auxotrophy YNB Glucose -0.1 N.D. +0.1 +0.1 -0.5
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 +0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. +0.4 +0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 -0.4 +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.4 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.9 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.3 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. +0.1 +0.5 +0.2
growth on ypd YPD +0.2 N.D. -0.0 +0.7 -0.1
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