Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12927 and 12928 are separated by 558 nucleotides12928 and 12929 are separated by 208 nucleotides12929 and 12930 are separated by 495 nucleotides12930 and 12931 are separated by 551 nucleotides mRNA_4559: 12927 - HMMPfam-PAP2 superfamily-PF01569,SMART-Acid phosphatase homologues-SM00014,SUPERFAMILY--SSF48317, at 460,890 to 462,526 12927 mRNA_4560: 12928 - Hypothetical Protein, at 463,085 to 464,279 12928 mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464,488 to 466,003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466,499 to 468,748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469,300 to 472,637 12931
Group Condition mRNA_4559 mRNA_4560 mRNA_4561 mRNA_4562 mRNA_4563
12927 12928 12929 12930 12931
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.5 -1.2 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.3 -1.5 -0.4 +1.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -1.0 +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. -0.5 -0.0 -0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 -0.2 -0.4 -0.4
auxotrophy Dropout Complete N.D. -0.2 +0.3 -0.6 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -1.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.6 +0.2 -0.4 -0.0
auxotrophy YNB Glucose N.D. +0.1 +0.1 -0.5 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.2 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 +0.1 -0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 -0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.3 +0.1 -0.6
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.1 -0.3 +0.4
growth on oleic acid YNB Glucose N.D. -0.1 +0.4 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.9 -0.4 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.4 +0.0 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 +0.8 -0.0
growth on ypd YPD N.D. -0.0 +0.7 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.5 +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.3 -0.1 +0.8
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