Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12929 and 12930 are separated by 495 nucleotides12930 and 12931 are separated by 551 nucleotides12931 and 12932 are separated by 675 nucleotides12932 and 12933 are separated by 478 nucleotides mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464,488 to 466,003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466,499 to 468,748 12930 mRNA_4563: 12931 - KOG1601 GATA-4/5/6 transcription factors, at 469,300 to 472,637 12931 mRNA_4564: 12932 - K11844 USP16_45 ubiquitin carboxyl-terminal hydrolase 16/45, at 473,313 to 477,203 12932 mRNA_4565: 12933 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 477,682 to 479,259 12933
Group Condition mRNA_4561 mRNA_4562 mRNA_4563 mRNA_4564 mRNA_4565
12929 12930 12931 12932 12933
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 -0.6 -1.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.1 -0.5 +0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.4 +1.0 +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.4 -0.1 -0.0
auxotrophy Dropout Complete +0.3 -0.6 -0.7 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 -0.0 +0.1 -1.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.4 -0.6 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.4 -0.3 -0.7
auxotrophy YNB Glucose +0.1 -0.5 -0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.6 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.8 -0.0 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 -0.2 -0.1 +1.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.2 +0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 -0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 +0.4 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +0.2 -0.5 +1.4 +0.3
growth on oleic acid YNB Glucose +0.4 -0.3 +0.2 +0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -0.3 +1.1 +0.1
growth on ypd YPD +0.7 -0.1 +0.0 +0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.2 +0.2 +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 +0.8 +0.4 +0.4
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