Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12935 and 12936 are separated by 219 nucleotides
12936 and 12937 are separated by 155 nucleotides
12937 and 12938 are separated by 217 nucleotides
12938 and 12939 are separated by 1038 nucleotides
mRNA_4567: 12935 - K10743 RNASEH2A ribonuclease H2 subunit A, at 484,052 to 485,585
12935
mRNA_4568: 12936 - Hypothetical Protein, at 485,805 to 489,325
12936
mRNA_4569: 12937 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 489,481 to 490,955
12937
mRNA_4570: 12938 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 491,173 to 492,372
12938
mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493,411 to 495,654
12939
Group
Condition
mRNA
_4567
mRNA
_4568
mRNA
_4569
mRNA
_4570
mRNA
_4571
12935
12936
12937
12938
12939
growth on oleic acid
YNB Glucose
-0.1
-0.1
-1.2
-0.8
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
+0.1
-0.7
-0.4
-0.6
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
+0.5
-1.1
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.7
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
-0.9
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
-0.0
-1.2
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.1
-0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.1
+0.0
-0.5
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.1
+0.8
-0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
+0.0
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
-0.5
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
+1.7
-0.4
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
+0.3
+0.7
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.0
+0.2
-0.4
+0.2
auxotrophy
YNB Glucose
+0.4
-0.2
+0.6
-0.8
+0.5
growth on ypd
YPD
+0.1
+0.0
+0.4
-0.3
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.3
+0.4
+0.7
-0.7
auxotrophy
Dropout Complete
+0.1
-0.3
+0.9
-0.7
+0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.2
+1.1
-0.7
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.1
+1.0
-0.8
+0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.1
+1.0
-0.2
+0.1
remove
mRNA_4567
plot
remove
mRNA_4568
plot
remove
mRNA_4569
remove
mRNA_4570
plot
remove
mRNA_4571
plot