Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12939 and 12940 are separated by 111 nucleotides12940 and 12941 are separated by 123 nucleotides12941 and 12942 are separated by 54 nucleotides12942 and 12943 are separated by 271 nucleotides mRNA_4571: 12939 - KOG4419 5' nucleotidase, at 493,411 to 495,654 12939 mRNA_4572: 12940 - K06963 TAN1, THUMPD1 tRNA acetyltransferase TAN1, at 495,766 to 497,109 12940 mRNA_4573: 12941 - K03142 TFIIH2, GTF2H2, SSL1 transcription initiation factor TFIIH subunit 2, at 497,233 to 498,989 12941 mRNA_4574: 12942 - K12184 VPS28 ESCRT-I complex subunit VPS28, at 499,044 to 500,144 12942 mRNA_4575: 12943 - HMMPfam-ICE2-PF08426, at 500,416 to 502,164 12943
Group Condition mRNA_4571 mRNA_4572 mRNA_4573 mRNA_4574 mRNA_4575
12939 12940 12941 12942 12943
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. N.D. N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.1 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 N.D. N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. N.D. N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. N.D. N.D. -0.3
growth on oleic acid YNB Glucose +0.0 N.D. N.D. N.D. +0.3
growth on ypd YPD +0.5 N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.7 N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. N.D. N.D. +0.7
auxotrophy YNB Glucose +0.5 N.D. N.D. N.D. +0.2
auxotrophy Dropout Complete +0.8 N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. N.D. +0.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. N.D. N.D. +0.8
remove
mRNA_4571
plot		 remove
mRNA_4572
plot		 remove
mRNA_4573		 remove
mRNA_4574
plot		 remove
mRNA_4575
plot