Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12942 and 12943 are separated by 271 nucleotides12943 and 12944 are separated by 287 nucleotides12944 and 12945 are separated by 751 nucleotides12945 and 12946 are separated by 680 nucleotides mRNA_4574: 12942 - K12184 VPS28 ESCRT-I complex subunit VPS28, at 499,044 to 500,144 12942 mRNA_4575: 12943 - HMMPfam-ICE2-PF08426, at 500,416 to 502,164 12943 mRNA_4576: 12944 - K00787 FDPS farnesyl diphosphate synthase, at 502,452 to 503,977 12944 mRNA_4577: 12945 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 504,729 to 505,838 12945 mRNA_4578: 12946 - Hypothetical Protein, at 506,519 to 507,162 12946
Group Condition mRNA_4574 mRNA_4575 mRNA_4576 mRNA_4577 mRNA_4578
12942 12943 12944 12945 12946
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.6 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 N.D. -0.2 N.D.
auxotrophy Dropout Complete N.D. -0.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 N.D. +0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. +0.2 N.D.
growth on ypd YPD N.D. -0.1 N.D. +0.3 N.D.
auxotrophy YNB Glucose N.D. +0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 N.D. -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 N.D. +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.8 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.9 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.7 N.D. +0.3 N.D.
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