Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12943 and 12944 are separated by 287 nucleotides12944 and 12945 are separated by 751 nucleotides12945 and 12946 are separated by 680 nucleotides12946 and 12947 are separated by 1508 nucleotides mRNA_4575: 12943 - HMMPfam-ICE2-PF08426, at 500,416 to 502,164 12943 mRNA_4576: 12944 - K00787 FDPS farnesyl diphosphate synthase, at 502,452 to 503,977 12944 mRNA_4577: 12945 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 504,729 to 505,838 12945 mRNA_4578: 12946 - Hypothetical Protein, at 506,519 to 507,162 12946 mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163 12947
Group Condition mRNA_4575 mRNA_4576 mRNA_4577 mRNA_4578 mRNA_4579
12943 12944 12945 12946 12947
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.2 N.D. -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 N.D. -0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.1 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.0 N.D. -0.3
auxotrophy Dropout Complete -0.1 N.D. -0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.2 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. +0.0 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. +0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.0 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. -0.2 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. +0.1 N.D. +0.4
growth on oleic acid YNB Glucose +0.3 N.D. -0.1 N.D. +0.0
auxotrophy YNB Glucose +0.2 N.D. -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.1 N.D. +0.5
growth on ypd YPD -0.1 N.D. +0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 N.D. +0.3 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.9 N.D. -0.2 N.D. +0.3
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