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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12946 and 12947 are separated by 1508 nucleotides
12947 and 12948 are separated by 1220 nucleotides
12948 and 12949 are separated by 265 nucleotides
12949 and 12950 are separated by 497 nucleotides
mRNA_4578: 12946 - Hypothetical Protein, at 506,519 to 507,162
12946
mRNA_4579: 12947 - KOG1399 Flavin-containing monooxygenase, at 508,671 to 511,163
12947
mRNA_4580: 12948 - Hypothetical Protein, at 512,384 to 513,483
12948
mRNA_4581: 12949 - K17964 LRPPRC leucine-rich PPR motif-containing protein, mitochondrial, at 513,749 to 516,613
12949
mRNA_4582: 12950 - KOG2450 Aldehyde dehydrogenase, at 517,111 to 519,102
12950
Group
Condition
mRNA
_4578
mRNA
_4579
mRNA
_4580
mRNA
_4581
mRNA
_4582
12946
12947
12948
12949
12950
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-1.3
-0.3
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.5
-0.2
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
-0.2
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.2
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-0.2
N.D.
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.0
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.6
-0.2
N.D.
+0.7
growth on oleic acid
YNB Oleic Acid
N.D.
-0.3
+0.2
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+0.5
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
+0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
+0.3
+0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.5
+0.1
N.D.
-0.2
auxotrophy
YNB Glucose
N.D.
+0.1
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
+0.2
N.D.
+0.2
growth on ypd
YPD
N.D.
+0.2
+0.1
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.4
+0.6
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
-0.0
+0.7
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
+0.7
N.D.
+0.2
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