Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12948 and 12949 are separated by 265 nucleotides12949 and 12950 are separated by 497 nucleotides12950 and 12951 are separated by 459 nucleotides12951 and 12952 are separated by 198 nucleotides mRNA_4580: 12948 - Hypothetical Protein, at 512,384 to 513,483 12948 mRNA_4581: 12949 - K17964 LRPPRC leucine-rich PPR motif-containing protein, mitochondrial, at 513,749 to 516,613 12949 mRNA_4582: 12950 - KOG2450 Aldehyde dehydrogenase, at 517,111 to 519,102 12950 mRNA_4583: 12951 - Hypothetical Protein, at 519,562 to 522,262 12951 mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522,461 to 526,317 12952
Group Condition mRNA_4580 mRNA_4581 mRNA_4582 mRNA_4583 mRNA_4584
12948 12949 12950 12951 12952
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.1 -1.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.1 -0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.0 -0.8 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.2 -0.6 -0.1
growth on oleic acid YNB Glucose -0.0 N.D. -0.2 -0.4 -0.2
growth on ypd YPD +0.1 N.D. +0.2 -0.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.0 +0.1 -0.6
growth on ricinoleic acid YNB Glucose +0.0 N.D. -0.1 -0.5 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.1 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.0 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.2 -0.4 +0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.0 -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.6 N.D. +0.1 -0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. -0.4 -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.2 -0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.1 +0.1 +0.1
auxotrophy YNB Glucose +0.1 N.D. +0.2 -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.7 N.D. +0.2 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.7 +0.1 +0.3
auxotrophy Dropout Complete +0.7 N.D. +0.3 -0.2 +0.1
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