Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12948 and 12949 are separated by 265 nucleotides
12949 and 12950 are separated by 497 nucleotides
12950 and 12951 are separated by 459 nucleotides
12951 and 12952 are separated by 198 nucleotides
mRNA_4580: 12948 - Hypothetical Protein, at 512,384 to 513,483
12948
mRNA_4581: 12949 - K17964 LRPPRC leucine-rich PPR motif-containing protein, mitochondrial, at 513,749 to 516,613
12949
mRNA_4582: 12950 - KOG2450 Aldehyde dehydrogenase, at 517,111 to 519,102
12950
mRNA_4583: 12951 - Hypothetical Protein, at 519,562 to 522,262
12951
mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522,461 to 526,317
12952
Group
Condition
mRNA
_4580
mRNA
_4581
mRNA
_4582
mRNA
_4583
mRNA
_4584
12948
12949
12950
12951
12952
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
+0.1
-1.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.1
-0.7
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
-0.0
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
-0.2
-0.6
-0.1
growth on oleic acid
YNB Glucose
-0.0
N.D.
-0.2
-0.4
-0.2
growth on ypd
YPD
+0.1
N.D.
+0.2
-0.7
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
-0.0
+0.1
-0.6
growth on ricinoleic acid
YNB Glucose
+0.0
N.D.
-0.1
-0.5
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.1
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
+0.0
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
-0.0
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
-0.2
-0.4
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
+0.0
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
N.D.
+0.1
-0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
-0.4
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.2
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.1
+0.1
+0.1
auxotrophy
YNB Glucose
+0.1
N.D.
+0.2
-0.2
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.7
N.D.
+0.2
-0.3
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
N.D.
+0.7
+0.1
+0.3
auxotrophy
Dropout Complete
+0.7
N.D.
+0.3
-0.2
+0.1
remove
mRNA_4580
plot
remove
mRNA_4581
plot
remove
mRNA_4582
remove
mRNA_4583
plot
remove
mRNA_4584
plot