Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12952 and 12953 are separated by 179 nucleotides12953 and 12954 are separated by 233 nucleotides12954 and 12955 are separated by 1052 nucleotides12955 and 12956 are separated by 902 nucleotides mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522,461 to 526,317 12952 mRNA_4585: 12953 - SUPERFAMILY--SSF103473, at 526,497 to 528,503 12953 mRNA_4586: 12954 - K16075 MRS2, MFM1 magnesium transporter, at 528,737 to 530,080 12954 mRNA_4587: 12955 - HMMPfam-Complex1_LYR-like-PF13232, at 531,133 to 531,604 12955 mRNA_4588: 12956 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 532,507 to 535,207 12956
Group Condition mRNA_4584 mRNA_4585 mRNA_4586 mRNA_4587 mRNA_4588
12952 12953 12954 12955 12956
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 -0.6 -1.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.5 -0.6 -1.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.4 -0.2 -0.4 -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.4 -1.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 -0.3 -0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.2 -0.3 -0.2 +0.2
growth on oleic acid YNB Glucose -0.2 -0.1 +0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 -0.3 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 -0.2 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.3 -0.6 -0.7 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 +0.3 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 -0.3 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 -0.4 -0.0 -0.1
growth on ypd YPD -0.4 -0.2 +0.0 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.6 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.7 -0.2 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 -0.1 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.0 -0.1 -0.0
auxotrophy YNB Glucose +0.5 +0.2 -0.2 -0.1 -0.1
auxotrophy Dropout Complete +0.1 +0.0 -0.1 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.2 +0.1 +0.2
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