Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12958 and 12959 are separated by 267 nucleotides12959 and 12960 are separated by 510 nucleotides12960 and 12961 are separated by 820 nucleotides12961 and 12962 are separated by 114 nucleotides mRNA_4590: 12958 - Hypothetical Protein, at 537,053 to 538,336 12958 mRNA_4591: 12959 - KOG0379 Kelch repeat-containing proteins, at 538,604 to 541,004 12959 mRNA_4592: 12960 - K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A, at 541,515 to 545,296 12960 mRNA_4593: 12961 - K05286 PIGB phosphatidylinositol glycan, class B, at 546,117 to 548,213 12961 mRNA_4594: 12962 - K19589 N6AMT1 release factor glutamine methyltransferase, at 548,328 to 549,291 12962
Group Condition mRNA_4590 mRNA_4591 mRNA_4592 mRNA_4593 mRNA_4594
12958 12959 12960 12961 12962
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 -1.9 N.D. N.D.
growth on ricinoleic acid YNB Glucose -1.0 +0.2 -2.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.0 -2.4 N.D. N.D.
auxotrophy Dropout Complete +0.1 +0.3 -2.4 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 -1.7 N.D. N.D.
auxotrophy YNB Glucose -0.1 +0.2 -2.1 N.D. N.D.
growth on ypd YPD -0.9 -0.2 -0.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.9 +0.4 -0.8 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 -0.8 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 -1.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 -0.9 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.0 -0.2 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 -0.5 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 -0.1 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +1.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.3 +1.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 +0.2 +1.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 +1.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 +1.8 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 +1.8 N.D. N.D.
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