Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12961 and 12962 are separated by 114 nucleotides12962 and 12963 are separated by 556 nucleotides12963 and 12964 are separated by 244 nucleotides12964 and 12965 are separated by 101 nucleotides mRNA_4593: 12961 - K05286 PIGB phosphatidylinositol glycan, class B, at 546,117 to 548,213 12961 mRNA_4594: 12962 - K19589 N6AMT1 release factor glutamine methyltransferase, at 548,328 to 549,291 12962 mRNA_4595: 12963 - KOG2186 Cell growth-regulating nucleolar protein, at 549,848 to 550,552 12963 mRNA_4596: 12964 - KOG4009 NADH-ubiquinone oxidoreductase, subunit NDUFB10/PDSW, at 550,797 to 551,736 12964 mRNA_4597: 12965 - K01836 PGM3 phosphoacetylglucosamine mutase, at 551,838 to 553,839 12965
Group Condition mRNA_4593 mRNA_4594 mRNA_4595 mRNA_4596 mRNA_4597
12961 12962 12963 12964 12965
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -1.7 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -1.5 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -1.4 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -1.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 N.D. N.D.
growth on ypd YPD N.D. N.D. +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.7 N.D. N.D.
auxotrophy YNB Glucose N.D. N.D. +0.7 N.D. N.D.
auxotrophy Dropout Complete N.D. N.D. +0.8 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +1.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +1.9 N.D. N.D.
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