Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12968 and 12969 are separated by 115 nucleotides12969 and 12970 are separated by 285 nucleotides12970 and 12971 are separated by 406 nucleotides12971 and 12972 are separated by 600 nucleotides mRNA_4600: 12968 - K08343 ATG3 ubiquitin-like-conjugating enzyme ATG3, at 558,585 to 560,759 12968 mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560,875 to 561,580 12969 mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561,866 to 562,949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563,356 to 565,108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565,709 to 567,987 12972
Group Condition mRNA_4600 mRNA_4601 mRNA_4602 mRNA_4603 mRNA_4604
12968 12969 12970 12971 12972
facs on lipid accumulation Sorted High BODIPY Gate -4.3 N.D. -0.1 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.8 N.D. -0.2 -0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. -0.4 -1.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.6 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.3 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.8 N.D. +0.2 +0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.1 -0.2 N.D.
growth on oleic acid YNB Glucose +0.1 N.D. -0.6 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.2 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.2 -0.1 N.D.
auxotrophy YNB Glucose -0.4 N.D. +0.2 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. +0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.2 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.0 +0.1 N.D.
auxotrophy Dropout Complete +0.0 N.D. +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. +0.2 +0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.3 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. -0.1 +0.5 N.D.
growth on ypd YPD +0.6 N.D. +0.6 +0.0 N.D.
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