Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12969 and 12970 are separated by 285 nucleotides12970 and 12971 are separated by 406 nucleotides12971 and 12972 are separated by 600 nucleotides12972 and 12973 are separated by 238 nucleotides mRNA_4601: 12969 - HMMPfam-Sen15 protein-PF09631,SUPERFAMILY--SSF53032, at 560,875 to 561,580 12969 mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561,866 to 562,949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563,356 to 565,108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565,709 to 567,987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568,226 to 569,633 12973
Group Condition mRNA_4601 mRNA_4602 mRNA_4603 mRNA_4604 mRNA_4605
12969 12970 12971 12972 12973
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 -1.3 N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 -0.6 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.5 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.5 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.6 N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.0 N.D. -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.1 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.2 N.D. +0.1
growth on oleic acid YNB Glucose N.D. -0.6 +0.1 N.D. +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.2 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.5 N.D. +0.6
growth on ypd YPD N.D. +0.6 +0.0 N.D. +0.4
auxotrophy Dropout Complete N.D. +0.1 +0.1 N.D. +0.8
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.0 N.D. +0.8
auxotrophy YNB Glucose N.D. +0.2 +0.0 N.D. +0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.6 N.D. +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.2 N.D. +1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.8 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.7 N.D. +0.7
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