Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12970 and 12971 are separated by 406 nucleotides12971 and 12972 are separated by 600 nucleotides12972 and 12973 are separated by 238 nucleotides12973 and 12974 are separated by 261 nucleotides mRNA_4602: 12970 - HMMPfam-NYN domain-PF01936, at 561,866 to 562,949 12970 mRNA_4603: 12971 - K07119 K07119 uncharacterized protein, at 563,356 to 565,108 12971 mRNA_4604: 12972 - K10747 LIG1 DNA ligase 1, at 565,709 to 567,987 12972 mRNA_4605: 12973 - KOG0254 Predicted transporter (major facilitator superfamily), at 568,226 to 569,633 12973 mRNA_4606: 12974 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,ProSitePatterns-Zinc-containing alcohol dehydrogenases signature.-PS00059,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 569,895 to 571,183 12974
Group Condition mRNA_4602 mRNA_4603 mRNA_4604 mRNA_4605 mRNA_4606
12970 12971 12972 12973 12974
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.3 N.D. +0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.6 N.D. -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.5 N.D. -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.6 N.D. +0.1 +0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.0 N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 N.D. -0.2 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. +0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. +0.1 +0.2
growth on oleic acid YNB Glucose -0.6 +0.1 N.D. +0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 N.D. +0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 N.D. +0.1 +0.1
growth on ypd YPD +0.6 +0.0 N.D. +0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 N.D. +0.8 -0.0
auxotrophy Dropout Complete +0.1 +0.1 N.D. +0.8 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 N.D. +0.6 +0.3
auxotrophy YNB Glucose +0.2 +0.0 N.D. +0.9 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.2 N.D. +1.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.6 N.D. +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.8 N.D. +0.5 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.7 N.D. +0.7 +0.2
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