Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12979 and 12980 are separated by 6200 nucleotides12980 and 12981 are separated by 3557 nucleotides12981 and 12982 are separated by 1049 nucleotides12982 and 12983 are separated by 2681 nucleotides mRNA_4611: 12979 - K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK, at 581,110 to 587,880 12979 mRNA_4612: 12980 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 594,081 to 594,633 12980 mRNA_4613: 12981 - BLAST phospholipid-translocating ATPase [Microbotryum lychn..., at 598,191 to 598,847 12981 mRNA_4614: 12982 - BLAST B-cell lymphoma/leukemia 11B [Orchesella cincta], at 599,897 to 601,386 12982 mRNA_4615: 12983 - Hypothetical Protein, at 604,068 to 604,303 12983
Group Condition mRNA_4611 mRNA_4612 mRNA_4613 mRNA_4614 mRNA_4615
12979 12980 12981 12982 12983
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.7 -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.3 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.2 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.0 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.3 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.1 +0.0 N.D.
auxotrophy Dropout Complete -0.1 N.D. -0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.1 -0.0 N.D.
auxotrophy YNB Glucose -0.1 N.D. +0.2 -0.1 N.D.
growth on ypd YPD -0.1 N.D. -0.1 +0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.4 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. +0.4 +0.4 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. +0.4 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. +0.3 +0.2 N.D.
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